Enformer

Maps DNA sequences to RNA expression and chromatin states using transformer networks.

What it does

Radically expands the sequence context window to over 100kb, allowing for accurate prediction of distally located enhancer variants.

How to use

See https://github.com/google-deepmind/deepmind-research for documentation and access.

STRC usage

Not directly applicable to E1659A via API. Requires local installation or web interface. See documentation for manual usage.

Connections

• STRC Variant c.4976A>C — Misha [see-also]
• STRC Gene [about]
• [part-of] Tools index