GATK gCNV

Broad Institute pipeline for robustly detecting germline copy number variants in WES and WGS data.

What it does

Utilizes probabilistic modeling to handle inherent sequencing noise and batch effects, providing highly accurate somatic and germline calls.

STRC usage

Not yet tested on E1659A.

Connections

• STRC Variant c.4976A>C — Misha [see-also]
• STRC Gene [about]
• [part-of] Tools index